Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs140174793 chr10:88231372 AT/A 2.03E-8 287 26.38 22.1 9.77 KM Plot
KIRP rs140250619 chr13:46964186 C/CG 4.91E-7 289 24.8 37.87 23.23 KM Plot
KIRP rs140272463 chr3:124638272 AG/A 7.19E-6 279 26.28 22.9 16.4 KM Plot
KIRP rs140272690 chr13:46985577 A/T 4.91E-7 289 24.8 37.87 23.23 KM Plot
KIRP rs140365013 chr6:27523869 G/A 1.18E-8 289 25.62 27.27 9.77 KM Plot
KIRP rs140396772 chr10:43530828 T/TA 4.13E-5 289 25.63 26.4 11.43 KM Plot
KIRP rs1404505 chr7:96320922 T/C 0 286 7.67 21.67 26 KM Plot
KIRP rs140558196 chr7:20701832 AAG/A 6.74E-6 288 25.93 23.1 11.2 KM Plot
KIRP rs140658888 chr7:20677994 ATAATT/A 2.53E-5 286 25.67 22.57 11.2 KM Plot
KIRP rs140782363 chr17:80736078 C/T 7.38E-9 282 26.07 26 16.4 KM Plot
KIRP rs141013201 chr6:27883077 T/TTA 2.21E-8 287 25.62 27.78 9.77 KM Plot
KIRP rs141084193 chr7:20702212 GA/G 6.74E-6 288 25.93 23.1 11.2 KM Plot
KIRP rs141111501 chr13:46962504 GGAAGGAAGGAAGGGC/G 4.91E-7 289 24.8 37.87 23.23 KM Plot
KIRP rs141145974 chr17:80838803 C/CCTTCCA 3.01E-6 285 26.07 22.8 16.77 KM Plot
KIRP rs141330597 chr1:226374604 TC/T 3.53E-5 277 25.57 28.63 21.43 KM Plot